Looking for DNA motifs Gibbs sampler (SeSiMCMC) result.

Input FastA file name: EC-ArcA.dnc

The sampler was looking for direct repeat sites on both strands of 9 sequences of length from 192 through 844.

The site length found is 15.
The sampler has tested the lengths in [6,22].
The motif is spaced at [4,10]..
The motif is formed by 9 motif sites.

All the positions are 0-based.

The background symbols probabilities
atgc
0.297 0.28 0.194 0.229


The table of positional symbols probabilities forming the motif
atgc
00.117 0.737 0.0893 0.0574
10.658 0.153 0.0893 0.099
20.783 0.112 0.0477 0.0574
30.0751 0.0699 0.0477 0.807
110.117 0.737 0.0893 0.0574
120.658 0.153 0.0893 0.099
130.783 0.112 0.0477 0.0574
140.0751 0.0699 0.0477 0.807

The description of sites
Gene IdPositionLengthScoreDirectionSite in sequenceSite-as-in-motif
EC|aldA148159.169>ttaatTAACaatgtatTCACcgaaattaatTAACaatgtatTCACcgaaa
EC|cydA2581511.52<tataaGTTAactaaatGTTAatattaatatTAACatttagtTAACttata
EC|glcC1461511.52<tcttgGTTAactcaatGTTAaattgcaattTAACattgagtTAACcaaga
EC|gltA541511.52<cagagGTTAactttctGTTAcctggccaggTAACagaaagtTAACctctg
EC|icdA91159.507>gccaaTTACaaatcatTAACaaaaagccaaTTACaaatcatTAACaaaaa
EC|lldP2381511.52>atacaTAACatttagtTAACcattcatacaTAACatttagtTAACcattc
EC|lpdA93158.78<ttgttGTTTaaaaattGTTAacaatattgtTAACaatttttAAACaacaa
EC|pflA8154.722>agattTGACtgaaatcGTACagtaaagattTGACtgaaatcGTACagtaa
EC|sodA206158.798>ttcaaTATCatttaatTAACtataattcaaTATCatttaatTAACtataa

The list of sites
EC|aldA        TAAC.......TCAC
EC|cydA        TAAC.......TAAC
EC|glcC        TAAC.......TAAC
EC|gltA        TAAC.......TAAC
EC|icdA        TTAC.......TAAC
EC|lldP        TAAC.......TAAC
EC|lpdA        TAAC.......AAAC
EC|pflA        TGAC.......GTAC
EC|sodA        TATC.......TAAC