Sampler results

  1. Looking for ArcA (negative response regulator of genes in aerobic pathways) binding motif in E. coli as a possibly spaced direct repeat.

  2. .
  3. Looking for NarP (a part of anaerobic redox regulatory system sensitive for nitrate/nitrite concentration changes in the environment) binding motif in E. coli as a possibly spaced palindrome.

  4. .


Tests on well-known regulators binding sites.

  1. Looking for ArgR (Arginine repressor) binding motif in E. coli as a generic signal.

  2. Looking for PurR (purine repressor) binding motif in E. coli as a generic signal.

  3. Looking for Crp (cyclic AMP receptor protein) binding motif in E. coli as a generic signal, possibly spaced.