Search for motifs!


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You need to set parameters:

Number of motifs:    
       
Motif representation: List about example
  PFM about example
  PWM / PSSM / PSWM about example
  List to PWM about example
  Consensus about example

Word & k mismatches
about example
  Mixed - different models for several factors
     
Complementary motifs included: yes no


The p-value may show how it is probably to get such number of occurrences of motif in a random sequence. And thus you could judge about non-randomness of your motif occurrences.

Last modified 15 January 2007